While the primary Gomphu Kora is near Trashigang, there is a related, smaller site with the same name in Trashi Yangtse. This is also a significant Buddhist site, associated with Guru Rinpoche (Padmasambhava). It is a cave temple, often featuring a large rock with an imprint said to be left by Guru Rinpoche.

This Gomphu Kora in Trashi Yangtse is a smaller, local pilgrimage site. It provides a more intimate and less crowded experience than the one in Trashigang. It is often a key site of local religious festivals and celebrations. Visiting this site offers a chance to understand local religious practices and the enduring influence of Guru Rinpoche in the region.